# Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
This module defines coordinate frames for describing the inputs and/or outputs
of a transform.
In the block diagram, the WCS pipeline has a two stage transformation (two
astropy Model instances), with an input frame, an output frame and an
intermediate frame.
.. code-block::
┌───────────────┐
│ │
│ Input │
│ Frame │
│ │
└───────┬───────┘
│
┌─────▼─────┐
│ Transform │
└─────┬─────┘
│
┌───────▼───────┐
│ │
│ Intermediate │
│ Frame │
│ │
└───────┬───────┘
│
┌─────▼─────┐
│ Transform │
└─────┬─────┘
│
┌───────▼───────┐
│ │
│ Output │
│ Frame │
│ │
└───────────────┘
Each frame instance is both metadata for the inputs/outputs of a transform and
also a converter between those inputs/outputs and richer coordinate
representations of those inputs/outputs.
For example, an output frame of type `~gwcs.coordinate_frames.SpectralFrame`
provides metadata to the `.WCS` object such as the ``axes_type`` being
``"SPECTRAL"`` and the unit of the output etc. The output frame also provides a
converter of the numeric output of the transform to a
`~astropy.coordinates.SpectralCoord` object, by combining this metadata with the
numerical values.
``axes_order`` and conversion between objects and arguments
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
One of the key concepts regarding coordinate frames is the ``axes_order`` argument.
This argument is used to map from the components of the frame to the inputs/outputs
of the transform. To illustrate this consider this situation where you have a
forward transform which outputs three coordinates ``[lat, lambda, lon]``. These
would be represented as a `.SpectralFrame` and a `.CelestialFrame`, however, the
axes of a `.CelestialFrame` are always ``[lon, lat]``, so by specifying two
frames as
.. code-block:: python
[SpectralFrame(axes_order=(1,)), CelestialFrame(axes_order=(2, 0))]
we would map the outputs of this transform into the correct positions in the frames.
As shown below, this is also used when constructing the inputs to the inverse
transform.
When taking the output from the forward transform the following transformation
is performed by the coordinate frames:
.. code-block::
lat, lambda, lon
│ │ │
└──────┼─────┼────────┐
┌───────────┘ └──┐ │
│ │ │
┌─────────▼────────┐ ┌──────▼─────▼─────┐
│ │ │ │
│ SpectralFrame │ │ CelestialFrame │
│ │ │ │
│ (1,) │ │ (2, 0) │
│ │ │ │
└─────────┬────────┘ └──────────┬────┬──┘
│ │ │
│ │ │
▼ ▼ ▼
SpectralCoord(lambda) SkyCoord((lon, lat))
When considering the backward transform the following transformations take place
in the coordinate frames before the transform is called:
.. code-block::
SpectralCoord(lambda) SkyCoord((lon, lat))
│ │ │
└─────┐ ┌────────────┘ │
│ │ ┌────────────┘
▼ ▼ ▼
[lambda, lon, lat]
│ │ │
│ │ │
┌──────▼─────▼────▼────┐
│ │
│ Sort by axes_order │
│ │
└────┬──────┬─────┬────┘
│ │ │
▼ ▼ ▼
lat, lambda, lon
"""
import abc
import contextlib
import logging
import numbers
from collections import defaultdict
from dataclasses import InitVar, dataclass
import numpy as np
from astropy import coordinates as coord
from astropy import time
from astropy import units as u
from astropy import utils as astutil
from astropy.coordinates import StokesCoord
from astropy.utils.misc import isiterable
from astropy.wcs.wcsapi.fitswcs import CTYPE_TO_UCD1
from astropy.wcs.wcsapi.high_level_api import (
high_level_objects_to_values,
values_to_high_level_objects,
)
from astropy.wcs.wcsapi.low_level_api import VALID_UCDS, validate_physical_types
__all__ = [
"BaseCoordinateFrame",
"CelestialFrame",
"CompositeFrame",
"CoordinateFrame",
"EmptyFrame",
"Frame2D",
"SpectralFrame",
"StokesFrame",
"TemporalFrame",
]
def _ucd1_to_ctype_name_mapping(ctype_to_ucd, allowed_ucd_duplicates):
inv_map = {}
new_ucd = set()
for kwd, ucd in ctype_to_ucd.items():
if ucd in inv_map:
if ucd not in allowed_ucd_duplicates:
new_ucd.add(ucd)
continue
inv_map[ucd] = allowed_ucd_duplicates.get(ucd, kwd)
if new_ucd:
logging.warning(
"Found unsupported duplicate physical type in 'astropy' mapping to CTYPE.\n"
"Update 'gwcs' to the latest version or notify 'gwcs' developer.\n"
"Duplicate physical types will be mapped to the following CTYPEs:\n"
+ "\n".join([f"{ucd!r:s} --> {inv_map[ucd]!r:s}" for ucd in new_ucd])
)
return inv_map
# List below allowed physical type duplicates and a corresponding CTYPE
# to which all duplicates will be mapped to:
_ALLOWED_UCD_DUPLICATES = {
"time": "TIME",
"em.wl": "WAVE",
}
UCD1_TO_CTYPE = _ucd1_to_ctype_name_mapping(
ctype_to_ucd=CTYPE_TO_UCD1, allowed_ucd_duplicates=_ALLOWED_UCD_DUPLICATES
)
STANDARD_REFERENCE_FRAMES = [frame.upper() for frame in coord.builtin_frames.__all__]
def get_ctype_from_ucd(ucd):
"""
Return the FITS ``CTYPE`` corresponding to a UCD1 value.
Parameters
----------
ucd : str
UCD string, for example one of ```WCS.world_axis_physical_types``.
Returns
-------
CTYPE : str
The corresponding FITS ``CTYPE`` value or an empty string.
"""
return UCD1_TO_CTYPE.get(ucd, "")
@dataclass
class FrameProperties:
naxes: InitVar[int]
axes_type: tuple[str]
unit: tuple[u.Unit] = None
axes_names: tuple[str] = None
axis_physical_types: list[str] = None
def __post_init__(self, naxes):
if isinstance(self.axes_type, str):
self.axes_type = (self.axes_type,)
else:
self.axes_type = tuple(self.axes_type)
if len(self.axes_type) != naxes:
msg = "Length of axes_type does not match number of axes."
raise ValueError(msg)
if self.unit is not None:
unit = tuple(self.unit) if astutil.isiterable(self.unit) else (self.unit,)
if len(unit) != naxes:
msg = "Number of units does not match number of axes."
raise ValueError(msg)
self.unit = tuple(u.Unit(au) for au in unit)
else:
self.unit = tuple(u.dimensionless_unscaled for na in range(naxes))
if self.axes_names is not None:
if isinstance(self.axes_names, str):
self.axes_names = (self.axes_names,)
else:
self.axes_names = tuple(self.axes_names)
if len(self.axes_names) != naxes:
msg = "Number of axes names does not match number of axes."
raise ValueError(msg)
else:
self.axes_names = tuple([""] * naxes)
if self.axis_physical_types is not None:
if isinstance(self.axis_physical_types, str):
self.axis_physical_types = (self.axis_physical_types,)
elif not isiterable(self.axis_physical_types):
msg = (
"axis_physical_types must be of type string or iterable of strings"
)
raise TypeError(msg)
if len(self.axis_physical_types) != naxes:
msg = f'"axis_physical_types" must be of length {naxes}'
raise ValueError(msg)
ph_type = []
for axt in self.axis_physical_types:
if axt not in VALID_UCDS and not axt.startswith("custom:"):
ph_type.append(f"custom:{axt}")
else:
ph_type.append(axt)
validate_physical_types(ph_type)
self.axis_physical_types = tuple(ph_type)
@property
def _default_axis_physical_types(self):
"""
The default physical types to use for this frame if none are specified
by the user.
"""
return tuple(f"custom:{t}" for t in self.axes_type)
[docs]
class BaseCoordinateFrame(abc.ABC):
"""
API Definition for a Coordinate frame
"""
_prop: FrameProperties
"""
The FrameProperties object holding properties in native frame order.
"""
@property
@abc.abstractmethod
def naxes(self) -> int:
"""
The number of axes described by this frame.
"""
@property
@abc.abstractmethod
def name(self) -> str:
"""
The name of the coordinate frame.
"""
@property
@abc.abstractmethod
def unit(self) -> tuple[u.Unit, ...]:
"""
The units of the axes in this frame.
"""
@property
@abc.abstractmethod
def axes_names(self) -> tuple[str, ...]:
"""
Names describing the axes of the frame.
"""
@property
@abc.abstractmethod
def axes_order(self) -> tuple[int, ...]:
"""
The position of the axes in the frame in the transform.
"""
@property
@abc.abstractmethod
def reference_frame(self):
"""
The reference frame of the coordinates described by this frame.
This is usually an Astropy object such as ``SkyCoord`` or ``Time``.
"""
@property
@abc.abstractmethod
def axes_type(self):
"""
An upcase string describing the type of the axis.
Known values are ``"SPATIAL", "TEMPORAL", "STOKES", "SPECTRAL", "PIXEL"``.
"""
@property
@abc.abstractmethod
def axis_physical_types(self):
"""
The UCD 1+ physical types for the axes, in frame order.
"""
@property
@abc.abstractmethod
def world_axis_object_classes(self):
"""
The APE 14 object classes for this frame.
See Also
--------
astropy.wcs.wcsapi.BaseLowLevelWCS.world_axis_object_classes
"""
@property
def world_axis_object_components(self):
"""
The APE 14 object components for this frame.
See Also
--------
astropy.wcs.wcsapi.BaseLowLevelWCS.world_axis_object_components
"""
if self.naxes == 1:
return self._native_world_axis_object_components
# If we have more than one axis then we should sort the native
# components by the axes_order.
ordered = np.array(self._native_world_axis_object_components, dtype=object)[
np.argsort(self.axes_order)
]
return list(map(tuple, ordered))
@property
@abc.abstractmethod
def _native_world_axis_object_components(self):
"""
This property holds the "native" frame order of the components.
The native order of the components is the order the frame assumes the
axes are in when creating the high level objects, for example
``CelestialFrame`` creates ``SkyCoord`` objects which are in lon, lat
order (in their positional args).
This property is used both to construct the ordered
``world_axis_object_components`` property as well as by `CompositeFrame`
to be able to get the components in their native order.
"""
[docs]
class CoordinateFrame(BaseCoordinateFrame):
"""
Base class for Coordinate Frames.
Parameters
----------
naxes : int
Number of axes.
axes_type : str
One of ["SPATIAL", "SPECTRAL", "TIME"]
axes_order : tuple of int
A dimension in the input data that corresponds to this axis.
reference_frame : astropy.coordinates.builtin_frames
Reference frame (usually used with output_frame to convert to world
coordinate objects).
unit : list of astropy.units.Unit
Unit for each axis.
axes_names : list
Names of the axes in this frame.
name : str
Name of this frame.
"""
def __init__(
self,
naxes,
axes_type,
axes_order,
reference_frame=None,
unit=None,
axes_names=None,
name=None,
axis_physical_types=None,
):
self._naxes = naxes
self._axes_order = tuple(axes_order)
self._reference_frame = reference_frame
if name is None:
self._name = self.__class__.__name__
else:
self._name = name
if len(self._axes_order) != naxes:
msg = "Length of axes_order does not match number of axes."
raise ValueError(msg)
if isinstance(axes_type, str):
axes_type = (axes_type,)
self._prop = FrameProperties(
naxes,
axes_type,
unit,
axes_names,
axis_physical_types or self._default_axis_physical_types(axes_type),
)
super().__init__()
def _default_axis_physical_types(self, axes_type):
"""
The default physical types to use for this frame if none are specified
by the user.
"""
return tuple(f"custom:{t}" for t in axes_type)
def __repr__(self):
fmt = (
f'<{self.__class__.__name__}(name="{self.name}", unit={self.unit}, '
f"axes_names={self.axes_names}, axes_order={self.axes_order}"
)
if self.reference_frame is not None:
fmt += f", reference_frame={self.reference_frame}"
fmt += ")>"
return fmt
def __str__(self):
if self._name is not None:
return self._name
return self.__class__.__name__
def _sort_property(self, prop):
sorted_prop = sorted(
zip(prop, self.axes_order, strict=False), key=lambda x: x[1]
)
return tuple([t[0] for t in sorted_prop])
@property
def name(self):
"""A custom name of this frame."""
return self._name
@name.setter
def name(self, val):
"""A custom name of this frame."""
self._name = val
@property
def naxes(self):
"""The number of axes in this frame."""
return self._naxes
@property
def unit(self):
"""The unit of this frame."""
return self._sort_property(self._prop.unit)
@property
def axes_names(self):
"""Names of axes in the frame."""
return self._sort_property(self._prop.axes_names)
@property
def axes_order(self):
"""A tuple of indices which map inputs to axes."""
return self._axes_order
@property
def reference_frame(self):
"""Reference frame, used to convert to world coordinate objects."""
return self._reference_frame
@property
def axes_type(self):
"""Type of this frame : 'SPATIAL', 'SPECTRAL', 'TIME'."""
return self._sort_property(self._prop.axes_type)
@property
def axis_physical_types(self):
"""
The axis physical types for this frame.
These physical types are the types in frame order, not transform order.
"""
return self._sort_property(self._prop.axis_physical_types)
@property
def world_axis_object_classes(self):
return {
f"{at}{i}" if i != 0 else at: (u.Quantity, (), {"unit": unit})
for i, (at, unit) in enumerate(zip(self.axes_type, self.unit, strict=False))
}
@property
def _native_world_axis_object_components(self):
return [
(f"{at}{i}" if i != 0 else at, 0, "value")
for i, at in enumerate(self._prop.axes_type)
]
@property
def serialized_classes(self):
"""
This property is used by the low level WCS API in Astropy.
By providing it we can duck type as a low level WCS object.
"""
return False
[docs]
def to_high_level_coordinates(self, *values):
"""
Convert "values" to high level coordinate objects described by this frame.
"values" are the coordinates in array or scalar form, and high level
objects are things such as ``SkyCoord`` or ``Quantity``. See
:ref:`wcsapi` for details.
Parameters
----------
values : `numbers.Number`, `numpy.ndarray`, or `~astropy.units.Quantity`
``naxis`` number of coordinates as scalars or arrays.
Returns
-------
high_level_coordinates
One (or more) high level object describing the coordinate.
"""
# We allow Quantity-like objects here which values_to_high_level_objects
# does not.
values = [
v.to_value(unit) if hasattr(v, "to_value") else v
for v, unit in zip(values, self.unit, strict=False)
]
if not all(
isinstance(v, numbers.Number) or type(v) is np.ndarray for v in values
):
msg = "All values should be a scalar number or a numpy array."
raise TypeError(msg)
high_level = values_to_high_level_objects(*values, low_level_wcs=self)
if len(high_level) == 1:
high_level = high_level[0]
return high_level
[docs]
def from_high_level_coordinates(self, *high_level_coords):
"""
Convert high level coordinate objects to "values" as described by this frame.
"values" are the coordinates in array or scalar form, and high level
objects are things such as ``SkyCoord`` or ``Quantity``. See
:ref:`wcsapi` for details.
Parameters
----------
high_level_coordinates
One (or more) high level object describing the coordinate.
Returns
-------
values : `numbers.Number` or `numpy.ndarray`
``naxis`` number of coordinates as scalars or arrays.
"""
values = high_level_objects_to_values(*high_level_coords, low_level_wcs=self)
if len(values) == 1:
values = values[0]
return values
[docs]
class EmptyFrame(CoordinateFrame):
"""
Represents a "default" detector frame. This is for use as the default value
for input frame by the WCS object.
"""
def __init__(self, name=None):
self._name = "detector" if name is None else name
def __repr__(self):
return f'<{type(self).__name__}(name="{self.name}")>'
def __str__(self):
if self._name is not None:
return self._name
return type(self).__name__
@property
def name(self):
"""A custom name of this frame."""
return self._name
@name.setter
def name(self, val):
"""A custom name of this frame."""
self._name = val
def _raise_error(self) -> None:
msg = "EmptyFrame does not have any information"
raise NotImplementedError(msg)
@property
def naxes(self):
self._raise_error()
@property
def unit(self):
self._raise_error()
@property
def axes_names(self):
self._raise_error()
@property
def axes_order(self):
self._raise_error()
@property
def reference_frame(self):
self._raise_error()
@property
def axes_type(self):
self._raise_error()
@property
def axis_physical_types(self):
self._raise_error()
@property
def world_axis_object_classes(self):
self._raise_error()
@property
def _native_world_axis_object_components(self):
self._raise_error()
[docs]
def to_high_level_coordinates(self, *values):
self._raise_error()
[docs]
def from_high_level_coordinates(self, *high_level_coords):
self._raise_error()
[docs]
class CelestialFrame(CoordinateFrame):
"""
Representation of a Celesital coordinate system.
This class has a native order of longitude then latitude, meaning
``axes_names``, ``unit`` and ``axis_physical_types`` should be lon, lat
ordered. If your transform is in a different order this should be specified
with ``axes_order``.
Parameters
----------
axes_order : tuple of int
A dimension in the input data that corresponds to this axis.
reference_frame : astropy.coordinates.builtin_frames
A reference frame.
unit : str or units.Unit instance or iterable of those
Units on axes.
axes_names : list
Names of the axes in this frame.
name : str
Name of this frame.
axis_physical_types : list
The UCD 1+ physical types for the axes, in frame order (lon, lat).
"""
def __init__(
self,
axes_order=None,
reference_frame=None,
unit=None,
axes_names=None,
name=None,
axis_physical_types=None,
):
naxes = 2
if (
reference_frame is not None
and not isinstance(reference_frame, str)
and reference_frame.name.upper() in STANDARD_REFERENCE_FRAMES
):
_axes_names = list(reference_frame.representation_component_names.values())
if "distance" in _axes_names:
_axes_names.remove("distance")
if axes_names is None:
axes_names = _axes_names
naxes = len(_axes_names)
self.native_axes_order = tuple(range(naxes))
if axes_order is None:
axes_order = self.native_axes_order
if unit is None:
unit = tuple([u.degree] * naxes)
axes_type = ["SPATIAL"] * naxes
pht = axis_physical_types or self._default_axis_physical_types(
reference_frame, axes_names
)
super().__init__(
naxes=naxes,
axes_type=axes_type,
axes_order=axes_order,
reference_frame=reference_frame,
unit=unit,
axes_names=axes_names,
name=name,
axis_physical_types=pht,
)
def _default_axis_physical_types(self, reference_frame, axes_names):
if isinstance(reference_frame, coord.Galactic):
return "pos.galactic.lon", "pos.galactic.lat"
if isinstance(
reference_frame,
coord.GeocentricTrueEcliptic | coord.GCRS | coord.PrecessedGeocentric,
):
return "pos.bodyrc.lon", "pos.bodyrc.lat"
if isinstance(reference_frame, coord.builtin_frames.BaseRADecFrame):
return "pos.eq.ra", "pos.eq.dec"
if isinstance(reference_frame, coord.builtin_frames.BaseEclipticFrame):
return "pos.ecliptic.lon", "pos.ecliptic.lat"
return tuple(f"custom:{t}" for t in axes_names)
@property
def world_axis_object_classes(self):
return {
"celestial": (
coord.SkyCoord,
(),
{"frame": self.reference_frame, "unit": self._prop.unit},
)
}
@property
def _native_world_axis_object_components(self):
return [
("celestial", 0, lambda sc: sc.spherical.lon.to_value(self._prop.unit[0])),
("celestial", 1, lambda sc: sc.spherical.lat.to_value(self._prop.unit[1])),
]
[docs]
class SpectralFrame(CoordinateFrame):
"""
Represents Spectral Frame
Parameters
----------
axes_order : tuple or int
A dimension in the input data that corresponds to this axis.
reference_frame : astropy.coordinates.builtin_frames
Reference frame (usually used with output_frame to convert to world
coordinate objects).
unit : str or units.Unit instance
Spectral unit.
axes_names : str
Spectral axis name.
name : str
Name for this frame.
"""
def __init__(
self,
axes_order=(0,),
reference_frame=None,
unit=None,
axes_names=None,
name=None,
axis_physical_types=None,
):
if not isiterable(unit):
unit = (unit,)
unit = [u.Unit(un) for un in unit]
pht = axis_physical_types or self._default_axis_physical_types(unit)
super().__init__(
naxes=1,
axes_type="SPECTRAL",
axes_order=axes_order,
axes_names=axes_names,
reference_frame=reference_frame,
unit=unit,
name=name,
axis_physical_types=pht,
)
def _default_axis_physical_types(self, unit):
if unit[0].physical_type == "frequency":
return ("em.freq",)
if unit[0].physical_type == "length":
return ("em.wl",)
if unit[0].physical_type == "energy":
return ("em.energy",)
if unit[0].physical_type == "speed":
return ("spect.dopplerVeloc",)
logging.warning(
"Physical type may be ambiguous. Consider "
"setting the physical type explicitly as "
"either 'spect.dopplerVeloc.optical' or "
"'spect.dopplerVeloc.radio'."
)
return (f"custom:{unit[0].physical_type}",)
@property
def world_axis_object_classes(self):
return {"spectral": (coord.SpectralCoord, (), {"unit": self.unit[0]})}
@property
def _native_world_axis_object_components(self):
return [("spectral", 0, lambda sc: sc.to_value(self.unit[0]))]
[docs]
class TemporalFrame(CoordinateFrame):
"""
A coordinate frame for time axes.
Parameters
----------
reference_frame : `~astropy.time.Time`
A Time object which holds the time scale and format.
If data is provided, it is the time zero point.
To not set a zero point for the frame initialize ``reference_frame``
with an empty list.
unit : str or `~astropy.units.Unit`
Time unit.
axes_names : str
Time axis name.
axes_order : tuple or int
A dimension in the data that corresponds to this axis.
name : str
Name for this frame.
"""
def __init__(
self,
reference_frame,
unit=u.s,
axes_order=(0,),
axes_names=None,
name=None,
axis_physical_types=None,
):
axes_names = (
axes_names
or f"{reference_frame.format}({reference_frame.scale}; "
f"{reference_frame.location}"
)
pht = axis_physical_types or self._default_axis_physical_types()
super().__init__(
naxes=1,
axes_type="TIME",
axes_order=axes_order,
axes_names=axes_names,
reference_frame=reference_frame,
unit=unit,
name=name,
axis_physical_types=pht,
)
self._attrs = {}
for a in self.reference_frame.info._represent_as_dict_extra_attrs:
with contextlib.suppress(AttributeError):
self._attrs[a] = getattr(self.reference_frame, a)
def _default_axis_physical_types(self):
return ("time",)
def _convert_to_time(self, dt, *, unit, **kwargs):
if (
not isinstance(dt, time.TimeDelta) and isinstance(dt, time.Time)
) or isinstance(self.reference_frame.value, np.ndarray):
return time.Time(dt, **kwargs)
if not hasattr(dt, "unit"):
dt = dt * unit
return self.reference_frame + dt
@property
def world_axis_object_classes(self):
comp = (
time.Time,
(),
{"unit": self.unit[0], **self._attrs},
self._convert_to_time,
)
return {"temporal": comp}
@property
def _native_world_axis_object_components(self):
if isinstance(self.reference_frame.value, np.ndarray):
return [("temporal", 0, "value")]
def offset_from_time_and_reference(time):
return (time - self.reference_frame).sec
return [("temporal", 0, offset_from_time_and_reference)]
[docs]
class CompositeFrame(CoordinateFrame):
"""
Represents one or more frames.
Parameters
----------
frames : list
List of constituient frames.
name : str
Name for this frame.
"""
def __init__(self, frames, name=None):
self._frames = frames[:]
naxes = sum([frame._naxes for frame in self._frames])
axes_order = []
axes_type = []
axes_names = []
unit = []
ph_type = []
for frame in frames:
axes_order.extend(frame.axes_order)
# Stack the raw (not-native) ordered properties
for frame in frames:
axes_type += list(frame._prop.axes_type)
axes_names += list(frame._prop.axes_names)
unit += list(frame._prop.unit)
ph_type += list(frame._prop.axis_physical_types)
if len(np.unique(axes_order)) != len(axes_order):
msg = (
"Incorrect numbering of axes, "
"axes_order should contain unique numbers, "
f"got {axes_order}."
)
raise ValueError(msg)
super().__init__(
naxes,
axes_type=axes_type,
axes_order=axes_order,
unit=unit,
axes_names=axes_names,
axis_physical_types=tuple(ph_type),
name=name,
)
self._axis_physical_types = tuple(ph_type)
@property
def frames(self):
"""
The constituient frames that comprise this `CompositeFrame`.
"""
return self._frames
def __repr__(self):
return repr(self.frames)
@property
def _wao_classes_rename_map(self):
mapper = defaultdict(dict)
seen_names = []
for frame in self.frames:
# ensure the frame is in the mapper
mapper[frame]
for key in frame.world_axis_object_classes:
if key in seen_names:
new_key = f"{key}{seen_names.count(key)}"
mapper[frame][key] = new_key
seen_names.append(key)
return mapper
@property
def _wao_renamed_components_iter(self):
mapper = self._wao_classes_rename_map
for frame in self.frames:
renamed_components = []
for component in frame._native_world_axis_object_components:
comp = list(component)
rename = mapper[frame].get(comp[0])
if rename:
comp[0] = rename
renamed_components.append(tuple(comp))
yield frame, renamed_components
@property
def _wao_renamed_classes_iter(self):
mapper = self._wao_classes_rename_map
for frame in self.frames:
for key, value in frame.world_axis_object_classes.items():
rename = mapper[frame].get(key)
yield rename if rename else key, value
@property
def world_axis_object_components(self):
out = [None] * self.naxes
for frame, components in self._wao_renamed_components_iter:
for i, ao in enumerate(frame.axes_order):
out[ao] = components[i]
if any(o is None for o in out):
msg = "axes_order leads to incomplete world_axis_object_components"
raise ValueError(msg)
return out
@property
def world_axis_object_classes(self):
return dict(self._wao_renamed_classes_iter)
[docs]
class StokesFrame(CoordinateFrame):
"""
A coordinate frame for representing Stokes polarisation states.
Parameters
----------
name : str
Name of this frame.
axes_order : tuple
A dimension in the data that corresponds to this axis.
"""
def __init__(
self,
axes_order=(0,),
axes_names=("stokes",),
name=None,
axis_physical_types=None,
):
pht = axis_physical_types or self._default_axis_physical_types()
super().__init__(
1,
["STOKES"],
axes_order,
name=name,
axes_names=axes_names,
unit=u.one,
axis_physical_types=pht,
)
def _default_axis_physical_types(self):
return ("phys.polarization.stokes",)
@property
def world_axis_object_classes(self):
return {
"stokes": (
StokesCoord,
(),
{},
)
}
@property
def _native_world_axis_object_components(self):
return [("stokes", 0, "value")]
[docs]
class Frame2D(CoordinateFrame):
"""
A 2D coordinate frame.
Parameters
----------
axes_order : tuple of int
A dimension in the input data that corresponds to this axis.
unit : list of astropy.units.Unit
Unit for each axis.
axes_names : list
Names of the axes in this frame.
name : str
Name of this frame.
"""
def __init__(
self,
axes_order=(0, 1),
unit=(u.pix, u.pix),
axes_names=("x", "y"),
name=None,
axes_type=None,
axis_physical_types=None,
):
if axes_type is None:
axes_type = ["SPATIAL", "SPATIAL"]
pht = axis_physical_types or self._default_axis_physical_types(
axes_names, axes_type
)
super().__init__(
naxes=2,
axes_type=axes_type,
axes_order=axes_order,
name=name,
axes_names=axes_names,
unit=unit,
axis_physical_types=pht,
)
def _default_axis_physical_types(self, axes_names, axes_type):
if axes_names is not None and all(axes_names):
ph_type = axes_names
else:
ph_type = axes_type
return tuple(f"custom:{t}" for t in ph_type)